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NA-MIC Project Weeks

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SlicerCBM: Computational Biophysics for Medicine in 3D Slicer

Key Investigators

Project Description

SlicerCBM is an extension for 3D Slicer that provides tools for creating and solving computational models of biophysical systems and processes with a focus on clinical and biomedical applications.


  1. Package SlicerCBM modules as an installable 3D Slicer extension.

  2. Improve documentation of individual modules and workflow.

Approach and Plan

  1. Complete the requirements for a new 3D Slicer extension (https://github.com/SlicerCBM/SlicerCBM/issues/8)

  2. Add the SlicerCBM extension to the Slicer Extensions Catalog.

Progress and Next Steps

  1. Individual modules have been developed and are available on GitHub (https://github.com/SlicerCBM/SlicerCBM)

  2. Checklist for submitting a new extension (https://github.com/SlicerCBM/SlicerCBM/issues/8)


Electrical Conductivity module in SlicerCBM

Background and References

Code repository and documentation:

Sample data: